Preheat oven to 375 degrees F. Line a muffin pan with liners or grease very well.
In a small bowl, combine the ground flaxseed and water to make the flax eggs. Stir and set aside to thicken.
In a large bowl, add the oat flour, almond flour, baking powder, baking soda, salt, and coconut sugar. Whisk until well combined and there are no clumps.
In a medium bowl, add the melted coconut oil, flax eggs, almond milk, apple cider vinegar, and vanilla. Whisk until well combined.
Add the wet to the dry ingredients. Using a spatula, mix until combined. Fold in the cherries, oats, and chocolate chips. Fill each muffin tin to the top. Bake for 25-27 minutes, or until lightly golden and a toothpick inserted in the middle come out clean. Let it cool in the pan for 10-15 minutes. Carefully remove (they are fragile) from the pan and place on a wire rack to cool completely. Enjoy!